an Eclipse launch configuration I use to run the command line version.
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<?xml version="1.0" encoding="UTF-8" standalone="no"?>
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<launchConfiguration type="org.eclipse.jdt.launching.localJavaApplication">
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<listAttribute key="org.eclipse.debug.core.MAPPED_RESOURCE_PATHS">
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<listEntry value="/checkstyle-v5/src/checkstyle/com/puppycrawl/tools/checkstyle/Main.java"/>
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</listAttribute>
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<listAttribute key="org.eclipse.debug.core.MAPPED_RESOURCE_TYPES">
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<listEntry value="1"/>
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</listAttribute>
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<booleanAttribute key="org.eclipse.debug.core.appendEnvironmentVariables" value="true"/>
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<listAttribute key="org.eclipse.debug.ui.favoriteGroups">
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<listEntry value="org.eclipse.debug.ui.launchGroup.run"/>
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</listAttribute>
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<stringAttribute key="org.eclipse.jdt.launching.MAIN_TYPE" value="com.puppycrawl.tools.checkstyle.Main"/>
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<stringAttribute key="org.eclipse.jdt.launching.PROGRAM_ARGUMENTS" value="-c ${project_loc}/checkstyle_checks.xml -r ${project_loc}/src/checkstyle"/>
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<stringAttribute key="org.eclipse.jdt.launching.PROJECT_ATTR" value="checkstyle-v5"/>
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<stringAttribute key="org.eclipse.jdt.launching.VM_ARGUMENTS" value="-Dcheckstyle.suppressions.file=${project_loc}/suppressions.xml -Dtranslation.severity=ignore -Dcheckstyle.header.file=${project_loc}/java.header -Dcheckstyle.importcontrol.file=${project_loc}/import-control.xml"/>
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</launchConfiguration>
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